Experts in de novo transcriptome assembly

We get your transcriptomes assembled and annotated

De novo transcriptome assembly and annotation from RNA-seq data is a complex, computationally intensive bioinformatic analysis. At AllGenetics, we ensure expert assessment and state-of-the-art transcriptome assembly workflows along with suitable computational resources for your project.

In our current workflows, we:

  • Pre-process the raw high-throughput sequencing data.
  • Normalise the coverage of raw reads.
  • De novo assemble the transcriptome.
  • Evaluate the quality and completeness of the assembly.
  • Generate different visualisations of the results.
  • Annotate the transcriptome.
Graph showing a typical workflow of a transcriptome assembly, including pre-processing, normalisation, and annotation. The workflow includes AllGenetics' free after-sales service.

What you receive

A report with a summary of the methods followed.

The results of the bioinformatic analysis including demultiplexing, pre-processing and quality control of the raw data, and the contigs and scaffolds assembled along with the annotation file.

If you require additional analyses, please let us know and we will do our best to meet your needs.
At no additional cost, our project specialists will be available to you after project delivery and during the editorial process of your scientific articles. We offer up to five 60-min sessions per project, depending on the project size.

Contact us for further information and pricing